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Table 4 The relative binding-free energies (kcal/mol) obtained by Prime MM–GBSA, where MMGBSA dG Bind = Complex − Receptor – Ligand and MMGBSA dG Bind(NS) = Complex − Receptor(from optimized complex) − Ligand(from optimized complex) = MMGBSA dG Bind − Receptor Strain − Ligand Strain. NS in the table is no strain; it is the binding energy without considering for the receptor and ligand conformational changes needed for the formation of complex

From: In silico molecular docking studies and MM/GBSA analysis of coumarin-carbonodithioate hybrid derivatives divulge the anticancer potential against breast cancer

Compound

MMGBSA-dG-binding energy

MMGBSA-dG-bind in Coulomb

MMGBSA-dG-bind(NS)

MMGBSA-dG bind(NS)-Coulomb

Alpelisib

− 19.9486

− 16.626

− 19.1304

− 6.18978

2f

− 18.6308

− 7.17531

− 17.3177

− 7.22135

2e

− 13.0734

− 0.6329

− 21.3911

− 0.3561