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Table 1 The sequence composition and thermodynamic properties of screened RNA aptamers

From: Search for RNA aptamers against non-structural protein of SARS-CoV-2: Design using molecular dynamics approach

S. no

Name of RNA aptamers

Sequences (5′–3′)

GC content (%)

Minimum free energy (kcal/mol)

1

RNA-001

GGAAACGGAAUGUCGAUUUCGUGGUUAUCC

46.67

− 5.90

2

RNA-005

GGGUUUGGACUUAGAUUUGGAACCCGACCC

53.33

− 8.90

3

RNA-010

UUUGGCCAACGGGAGAGUUAAGGUCAUAAA

43.33

− 6.40

4

RNA-025

GUGAUAUCUAUGAAUGCGUAGCAGUGGCAC

46.67

− 6.60

5

RNA-040

UGGUAAUCAGUCUGGAUUGAGUCAGACCCA

46.67

− 6.20

6

RNA-053

UGUUUGUACACGACAAAAGUGUCGUGUACA

40.00

− 15.60

7

RNA-073

GAGUUUGUGUGCGGUAGCAUCAUCAAACUC

46.67

− 11.70

8

RNA-086

ACGUAAGGGGUGAUAUUGAUUACGCCGCGU

50.00

− 9.30

9

RNA-091

AAGUGAAAUGGUGUGCCGCACUGUUUGCUU

46.67

− 8.10

10

RNA-097

GUUCUCUUUACACAGUUGAGGGGAAUAAAC

40.00

− 8.30