Skip to main content

Table 4 The prediction of secondary structure prediction of miRNAs using RNAcofold

From: Employing in silico investigations to determine the cross-kingdom approach for Curcuma longa miRNAs and their human targets

miRNAs

miRNAs secondary structure

Dot bracket plot

MFE (kcal/mol)

miRNA 167

View full size image

UCUAGUACGACCGUCGAAGU&UGAAGCUGCCAGCAUGAUCU

……..((.(((……&….(((…)))))).))

− 2.50

miRNA 129

UUCCUUCCCUAGGGAGGCCU&UCCGGAGGGAUCCCUUCCUU

..((((((…))))))…&…((((((…)))))).

− 14.30

miRNA 756

AACUUUGACGGUCUACUAGA&AGAUCAUCUGGCAGUUUCAA

((((..((.(((((……&))))).))….))))…

− 6.20

miRNA 1525

GUAUUUUUGAAUUAAUUGAGU&UGAGUUAAUUAAGUUUUUAUG

………((((((((….&..))))))))……….

− 4.30

miRNA 1568

View full size image

GCCCUCGCUUCUGCUGCGGC&CGGCGUCGUCUUCGCUCCCG

(((.((((…….)))).&.)))……………

− 9.00